Index

A

activeselection() (in module scSemiProfiler_dev.representative_selection)

assemble_cohort() (in module scSemiProfiler_dev.utils) assemble_representatives() (in module scSemiProfiler_dev.utils)

C

celltype_proportion() (in module scSemiProfiler_dev.utils) celltype_signature_comparison() (in module scSemiProfiler_dev.utils) comb() (in module scSemiProfiler_dev.utils)

compare_adata_umaps() (in module scSemiProfiler_dev.utils) compare_umaps() (in module scSemiProfiler_dev.utils) composition_by_group() (in module scSemiProfiler_dev.utils)

E

enrichment_comparison() (in module scSemiProfiler_dev.utils)

errorcurve() (in module scSemiProfiler_dev.utils) estimate_cost() (in module scSemiProfiler_dev.utils)

F

faiss_knn() (in module scSemiProfiler_dev.utils)

G

geneset_pattern() (in module scSemiProfiler_dev.utils)

get_eg_representatives() (in module scSemiProfiler_dev.get_eg_representatives) get_error() (in module scSemiProfiler_dev.utils)

H

hyperp() (in module scSemiProfiler_dev.utils)

hypert() (in module scSemiProfiler_dev.utils)

I

initsetup() (in module scSemiProfiler_dev.initial_setup)

L

loss_curve() (in module scSemiProfiler_dev.utils)

M

module scSemiProfiler_dev.get_eg_representatives scSemiProfiler_dev.inference scSemiProfiler_dev.initial_setup scSemiProfiler_dev.representative_selection scSemiProfiler_dev.singlecell_process scSemiProfiler_dev.utils, [1]

R

rrho() (in module scSemiProfiler_dev.utils)

S

scinfer() (in module scSemiProfiler_dev.inference) scprocess() (in module scSemiProfiler_dev.singlecell_process) scSemiProfiler_dev.get_eg_representatives module scSemiProfiler_dev.inference module scSemiProfiler_dev.initial_setup module

scSemiProfiler_dev.representative_selection module scSemiProfiler_dev.singlecell_process module scSemiProfiler_dev.utils module, [1]

V

visualize_inferred() (in module scSemiProfiler_dev.utils)

visualize_recon() (in module scSemiProfiler_dev.utils)