scSemiProfiler_dev.utils.celltype_signature_comparison¶
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scSemiProfiler_dev.utils.celltype_signature_comparison(gtdata, semisdata, celltype_key)[source]¶ Use dotplot to compare the cell type signatures found using the real-profiled dataset and the semi-profiled datset.
- Parameters
gtdata (
anndata._core.anndata.AnnData) – The real-profiled datasetsemisdata (
anndata._core.anndata.AnnData) – The semi-profiled datasetcelltype_key (
str) – The key in .obs specifying the cell type labels
Example
>>> celltype_signature_comparison(gtdata=gtdata,semisdata=semisdata,celltype_key='celltypes')
- Return type